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Proteins

95 questions found

Practice Questions

The hydrophobic effect in protein folding is primarily driven by an increase in the

A. Protein enthalpy
B. Entropy of surrounding water
C. Number of peptide bonds
D. Salt concentration

Burying hydrophobic residues releases ordered water molecules, increasing entropy.

nmdcat.online BIO NMDCAT
Jun 29, 2026

A protein domain is considered part of the

A. Primary structure
B. Secondary structure
C. Tertiary structure
D. Quaternary structure

Domains are independently folded structural units within one polypeptide.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Amphipathic α-helices are commonly found

A. Buried inside globular proteins
B. Spanning membranes or lining channels
C. In collagen
D. In silk fibroin

Amphipathic helices possess hydrophobic and hydrophilic faces suited for membrane environments.

nmdcat.online BIO NMDCAT
Jun 29, 2026

The coiled-coil structure of α-keratin is stabilized mainly by

A. Peptide bonds
B. Hydrogen bonds with water
C. Hydrophobic interactions between helices
D. Glycosidic bonds

Hydrophobic residues at heptad repeat positions interlock to stabilize the coiled-coil.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Anfinsen’s experiment demonstrated that

A. Chaperones are always required
B. Primary sequence contains all information for protein folding
C. ATP is needed for protein folding
D. Disulfide bonds determine sequence

RNase A spontaneously refolded after denaturation, proving sequence determines structure.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Protein concentration is commonly estimated by measuring absorbance at

A. 260 nm
B. 280 nm
C. 340 nm
D. 540 nm

Tryptophan and tyrosine absorb ultraviolet light strongly near 280 nm.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Vitamin C deficiency causes scurvy because it prevents

A. Peptide bond formation
B. α-Helix formation
C. Hydroxylation of proline, destabilizing collagen
D. Protein synthesis

Hydroxyproline stabilizes the collagen triple helix through hydrogen bonding.

nmdcat.online BIO NMDCAT
Jun 29, 2026

pI = (2.34 + 9.60)/2 = 5.97.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Myoglobin is especially suited for

A. Oxygen transport
B. Oxygen storage in muscle
C. Carbon dioxide transport
D. Electron transport

Myoglobin has a high oxygen affinity and releases oxygen only at low oxygen tension.

nmdcat.online BIO NMDCAT
Jun 29, 2026

The induced-fit model proposes that an enzyme active site is

A. Completely rigid
B. Flexible and changes shape after substrate binding
C. Formed only after ATP binding
D. Located outside the protein

Substrate binding induces conformational changes that optimize catalysis.

nmdcat.online BIO NMDCAT
Jun 29, 2026

A β-turn generally consists of

A. Two residues
B. Three residues
C. Four residues
D. Six residues

β-turns reverse the direction of the polypeptide chain and are stabilized by hydrogen bonding.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Positive cooperativity in hemoglobin is an example of

A. Competitive inhibition
B. Allosteric regulation
C. Irreversible inhibition
D. Denaturation

Oxygen binding at one site increases affinity at other sites through conformational change.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Glycine is frequently found in β-turns because it

A. Has a positive charge
B. Has minimal steric hindrance
C. Forms disulfide bonds
D. Is aromatic

Glycine's small side chain allows conformations inaccessible to other amino acids.

nmdcat.online BIO NMDCAT
Jun 29, 2026

The Bohr effect facilitates

A. Oxygen uptake in lungs
B. Oxygen release in active tissues
C. Hemoglobin synthesis
D. Iron absorption

Low pH and high CO₂ reduce oxygen affinity, promoting oxygen delivery.

nmdcat.online BIO NMDCAT
Jun 29, 2026

α-Helices are destabilized by consecutive residues of

A. Alanine and Glycine
B. Valine and Isoleucine
C. Serine and Cysteine
D. Aspartate and Glutamate

Branched β-carbon side chains create steric hindrance in α-helices.

nmdcat.online BIO NMDCAT
Jun 29, 2026

A Ramachandran plot point outside allowed regions for a non-glycine residue most likely indicates

A. Exceptional stability
B. Modeling error or rare strained conformation
C. Disulfide bond formation
D. Enzyme active site

Most φ and ψ angle combinations are sterically forbidden for amino acids other than glycine.

nmdcat.online BIO NMDCAT
Jun 29, 2026

The amino acid sequence of a protein is ultimately determined by the

A. Protein's carbohydrate chains
B. mRNA cap
C. DNA nucleotide sequence
D. Disulfide bonds

The genetic code in DNA determines the amino acid sequence through transcription and translation.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Pepsin is secreted as pepsinogen in order to

A. Improve digestion
B. Prevent digestion of gastric cells
C. Increase catalytic efficiency
D. Enhance absorption

Digestive enzymes are secreted as inactive zymogens to protect tissues from self-digestion.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Protein denaturation by heat generally does not break

A. Hydrogen bonds
B. Ionic bonds
C. Hydrophobic interactions
D. Covalent peptide bonds

Heat disrupts weak interactions but usually leaves the covalent peptide backbone intact.

nmdcat.online BIO NMDCAT
Jun 29, 2026
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