MCQs

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Practice Questions

A protein domain is considered part of the

A. Primary structure
B. Secondary structure
C. Tertiary structure
D. Quaternary structure

Domains are independently folded structural units within one polypeptide.

nmdcat.online BIO NMDCAT
Jun 29, 2026

The hydrophobic effect in protein folding is primarily driven by an increase in the

A. Protein enthalpy
B. Entropy of surrounding water
C. Number of peptide bonds
D. Salt concentration

Burying hydrophobic residues releases ordered water molecules, increasing entropy.

nmdcat.online BIO NMDCAT
Jun 29, 2026

The amino acid sequence of a protein is ultimately determined by the

A. Protein's carbohydrate chains
B. mRNA cap
C. DNA nucleotide sequence
D. Disulfide bonds

The genetic code in DNA determines the amino acid sequence through transcription and translation.

nmdcat.online BIO NMDCAT
Jun 29, 2026

α-Helices are destabilized by consecutive residues of

A. Alanine and Glycine
B. Valine and Isoleucine
C. Serine and Cysteine
D. Aspartate and Glutamate

Branched β-carbon side chains create steric hindrance in α-helices.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Hemoglobin exhibits a sigmoidal oxygen-binding curve because of

A. Presence of heme
B. High molecular weight
C. Cooperative binding due to quaternary structure
D. Ferric iron

Binding of oxygen to one subunit increases affinity of the remaining subunits.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Silk fibroin owes its strength and flexibility mainly to repetitive sequences rich in

A. Gly-Ser-Gly-Ala-Gly-Ala
B. Pro-Hyp-Gly
C. Ala-Lys-Thr-Arg
D. Glu-Asp-Val-Phe

These repetitive sequences allow close packing of antiparallel β-sheets.

nmdcat.online BIO NMDCAT
Jun 29, 2026

The Ramachandran plot describes protein backbone geometry using the angles

A. ω and ψ
B. φ and ψ
C. φ and ω
D. χ and ψ

The φ (phi) and ψ (psi) angles define backbone conformation in proteins.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Insulin is synthesized as a precursor. The connecting segment removed during maturation is called the

A. Signal peptide
B. C-peptide
C. Leader peptide
D. Heme group

The C-peptide connects the A and B chains in proinsulin and is removed to form mature insulin.

nmdcat.online BIO NMDCAT
Jun 29, 2026

The peptide bond is unusually planar because of resonance. The atoms lying in the peptide plane are the

A. α-carbon, amino group, and R-group
B. Carbonyl carbon, carbonyl oxygen, amide nitrogen, amide hydrogen, and the two adjacent α-carbons
C. Carbonyl carbon and amide nitrogen only
D. Entire side chains of both amino acids

Resonance restricts rotation around the peptide bond, making these six atoms coplanar.

nmdcat.online BIO NMDCAT
Jun 29, 2026

The levels of protein structure are hierarchical. A structure composed of a single polypeptide chain with two independently folding domains is best described as having

A. Primary structure only
B. Secondary structure only
C. Tertiary structure with domains
D. Quaternary structure

Domains are independently folded regions within a single polypeptide and are part of tertiary structure.

nmdcat.online BIO NMDCAT
Jun 29, 2026

In sickle cell anemia, a single amino acid substitution in the β-chain of hemoglobin replaces a hydrophilic glutamate with a hydrophobic valine at position six. This change directly affects the protein’s structure by

A. Disrupting a critical disulfide bond in the quaternary structure
B. Introducing a sticky hydrophobic patch on the protein surface that causes polymerization of deoxygenated hemoglobin
C. Breaking the iron-porphyrin coordination bond in the heme group
D. Causing the complete dissociation of the α and β subunits

The Val-6 substitution creates a hydrophobic patch on deoxyhemoglobin, leading to polymerization and sickling of red blood cells.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Disulfide bonds are most commonly formed in the

A. Cytosol
B. Endoplasmic reticulum
C. Nucleus
D. Mitochondrial matrix

The oxidizing environment of the endoplasmic reticulum promotes the formation of disulfide bonds in secreted and membrane proteins.

nmdcat.online BIO NMDCAT
Jun 29, 2026

A functional protein differs from a simple polypeptide because it

A. Is always multimeric
B. Has a stable three-dimensional conformation required for activity
C. Contains only essential amino acids
D. Always contains a prosthetic group

Protein function depends on proper folding into the native three-dimensional structure.

nmdcat.online BIO NMDCAT
Jun 29, 2026

The prosthetic group present in hemoglobin contains

A. Zinc
B. Iron
C. Magnesium
D. Copper

The heme prosthetic group contains Fe²⁺, which reversibly binds oxygen.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Adjacent strands in β-sheets may run in the same or opposite directions. These arrangements are called

A. Cis and trans
B. Parallel and antiparallel
C. Right-handed and left-handed
D. Axial and equatorial

β-sheets are classified according to the orientation of adjacent strands.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Histidine is commonly found in enzyme active sites because its imidazole side chain can

A. Form peptide bonds
B. Donate and accept protons near physiological pH
C. Form disulfide bonds
D. Bind DNA specifically

Histidine's pKa is close to physiological pH, making it ideal for acid-base catalysis.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Molecular chaperones such as Hsp70 primarily function by

A. Synthesizing peptide bonds
B. Preventing aggregation of unfolded proteins and assisting correct folding
C. Breaking disulfide bonds
D. Degrading proteins

Chaperones bind exposed hydrophobic regions of unfolded proteins, preventing aggregation and promoting correct folding.

nmdcat.online BIO NMDCAT
Jun 29, 2026

Protein denaturation by heat generally does not break

A. Hydrogen bonds
B. Ionic bonds
C. Hydrophobic interactions
D. Covalent peptide bonds

Heat disrupts weak interactions but usually leaves the covalent peptide backbone intact.

nmdcat.online BIO NMDCAT
Jun 29, 2026

The most abundant amino acid in collagen is

A. Cysteine
B. Glycine
C. Lysine
D. Tryptophan

Collagen contains the repeating sequence Gly-X-Y. Glycine occurs every third residue, allowing tight packing of the triple helix.

nmdcat.online BIO NMDCAT
Jun 29, 2026
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