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Practice Questions

Insulin is synthesized as a precursor. The connecting segment removed during maturation is called the

A. Signal peptide
B. C-peptide ✓
C. Leader peptide
D. Heme group

The C-peptide connects the A and B chains in proinsulin and is removed to form mature insulin.

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Jun 29, 2026

The peptide bond is unusually planar because of resonance. The atoms lying in the peptide plane are the

A. α-carbon, amino group, and R-group
B. Carbonyl carbon, carbonyl oxygen, amide nitrogen, amide hydrogen, and the two adjacent α-carbons ✓
C. Carbonyl carbon and amide nitrogen only
D. Entire side chains of both amino acids

Resonance restricts rotation around the peptide bond, making these six atoms coplanar.

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Jun 29, 2026

The levels of protein structure are hierarchical. A structure composed of a single polypeptide chain with two independently folding domains is best described as having

A. Primary structure only
B. Secondary structure only
C. Tertiary structure with domains ✓
D. Quaternary structure

Domains are independently folded regions within a single polypeptide and are part of tertiary structure.

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Jun 29, 2026

In sickle cell anemia, a single amino acid substitution in the β-chain of hemoglobin replaces a hydrophilic glutamate with a hydrophobic valine at position six. This change directly affects the protein’s structure by

A. Disrupting a critical disulfide bond in the quaternary structure
B. Introducing a sticky hydrophobic patch on the protein surface that causes polymerization of deoxygenated hemoglobin ✓
C. Breaking the iron-porphyrin coordination bond in the heme group
D. Causing the complete dissociation of the α and β subunits

The Val-6 substitution creates a hydrophobic patch on deoxyhemoglobin, leading to polymerization and sickling of red blood cells.

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Jun 29, 2026

Disulfide bonds are most commonly formed in the

A. Cytosol
B. Endoplasmic reticulum ✓
C. Nucleus
D. Mitochondrial matrix

The oxidizing environment of the endoplasmic reticulum promotes the formation of disulfide bonds in secreted and membrane proteins.

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Jun 29, 2026

A functional protein differs from a simple polypeptide because it

A. Is always multimeric
B. Has a stable three-dimensional conformation required for activity ✓
C. Contains only essential amino acids
D. Always contains a prosthetic group

Protein function depends on proper folding into the native three-dimensional structure.

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Jun 29, 2026

The prosthetic group present in hemoglobin contains

A. Zinc
B. Iron ✓
C. Magnesium
D. Copper

The heme prosthetic group contains Fe²⁺, which reversibly binds oxygen.

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Jun 29, 2026

Adjacent strands in β-sheets may run in the same or opposite directions. These arrangements are called

A. Cis and trans
B. Parallel and antiparallel ✓
C. Right-handed and left-handed
D. Axial and equatorial

β-sheets are classified according to the orientation of adjacent strands.

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Jun 29, 2026

Histidine is commonly found in enzyme active sites because its imidazole side chain can

A. Form peptide bonds
B. Donate and accept protons near physiological pH ✓
C. Form disulfide bonds
D. Bind DNA specifically

Histidine's pKa is close to physiological pH, making it ideal for acid-base catalysis.

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Jun 29, 2026

Molecular chaperones such as Hsp70 primarily function by

A. Synthesizing peptide bonds
B. Preventing aggregation of unfolded proteins and assisting correct folding ✓
C. Breaking disulfide bonds
D. Degrading proteins

Chaperones bind exposed hydrophobic regions of unfolded proteins, preventing aggregation and promoting correct folding.

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Jun 29, 2026

Protein denaturation by heat generally does not break

A. Hydrogen bonds
B. Ionic bonds
C. Hydrophobic interactions
D. Covalent peptide bonds ✓

Heat disrupts weak interactions but usually leaves the covalent peptide backbone intact.

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Jun 29, 2026

The most abundant amino acid in collagen is

A. Cysteine
B. Glycine ✓
C. Lysine
D. Tryptophan

Collagen contains the repeating sequence Gly-X-Y. Glycine occurs every third residue, allowing tight packing of the triple helix.

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Jun 29, 2026

The quaternary structure of a protein refers to

A. Amino acid sequence
B. Folding of one polypeptide chain
C. Association of multiple folded polypeptide subunits ✓
D. Formation of peptide bonds

Quaternary structure exists only in proteins composed of more than one polypeptide chain, such as hemoglobin.

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Jun 29, 2026

The tertiary structure of a water-soluble globular protein is mainly driven by

A. Formation of glycosidic bonds
B. Burial of hydrophobic side chains inside the protein ✓
C. Complete ionization of all amino acids
D. Peptide bond formation

The hydrophobic effect causes non-polar side chains to cluster in the interior, minimizing contact with water and stabilizing the folded structure.

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Jun 29, 2026

In the α-helix structure, the stabilizing hydrogen bond forms between residues

A. i and i+1
B. i and i+2
C. i and i+4 ✓
D. i and i+5

In an α-helix, the carbonyl oxygen of residue i hydrogen bonds with the amide hydrogen of residue i+4, producing the stable helical conformation.

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Jun 29, 2026

The secondary structure of a protein, such as the α-helix, is primarily stabilized by

A. Disulfide bridges
B. Hydrophobic interactions
C. Hydrogen bonds between the backbone carbonyl oxygen and amide hydrogen ✓
D. Peptide bonds

Secondary structures are stabilized by hydrogen bonding between peptide backbone atoms rather than side chains.

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Jun 29, 2026

Basic amino acids have side chains that accept protons. Lysine contains an ε-amino group that is positively charged at physiological pH.

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Jun 29, 2026

The formation of a peptide bond between two amino acids is a classic example of a condensation reaction, where the new bond is formed with the simultaneous release of

A. A molecule of carbon dioxide
B. A molecule of ammonia
C. A molecule of water ✓
D. A phosphate ion

Peptide bond formation is a dehydration synthesis. The carboxyl group (-COOH) of one amino acid reacts with the amino group (-NH₂) of another, releasing a water molecule (H₂O) and forming a covalent amide linkage (-CO-NH-).

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Jun 29, 2026

The primary structure of a protein refers to the

A. Local folding patterns like α-helices and β-sheets
B. Overall three-dimensional fold of a single polypeptide chain
C. Linear sequence of amino acids joined by peptide bonds ✓
D. Association of multiple polypeptide subunits

Primary structure is the linear, genetically determined sequence of amino acids in a polypeptide chain, held together by covalent peptide bonds. This sequence dictates all higher levels of protein structure.

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Jun 29, 2026
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